This is a preview instance. Do not rely on this data for real analyses.

PPD_005BGU2.1

DENV-2/India/D2.18/2025-09-25
A. Ghosh, A. Banerjee, S. Bakshi, U. Baskey & P. C. Sadhukhan

ICMR-NIRBI, KOLKATA, ICMR Virus Laboratory

Sample details

Collection date
2025-09-25
Sampling location
India (West Bengal)
Isolate name
D2.18

Data use terms

Data use terms
OPEN

Data use terms history

ChangedUserData use terms
2026-06-09 17:07insdc_ingest_userOPEN
Data use terms URL

Lineage & Serotype

Lineage
2II_F.1.1
Serotype
DENV-2

INSDC

INSDC accession
NCBI release date
2026-06-06
NCBI update date
2026-06-06

Host

Host

Submission details

Submission ID
PZ477637.1
Submitting group
Date submitted
2026-06-09 17:05:55 UTC
Date released
2026-06-09 17:46:47 UTC
Earliest release date
2026-06-06

Alignment and QC

Length
390 (3.64%)
# of SNPs
21

Nucleotide mutations

Mutations called relative to the NC_001474.2 reference

Substitutions

  • G2157A
  • G2160A
  • C2193T
  • T2199C
  • T2209C
  • T2223C
  • T2241C
  • A2271G
  • A2320G
  • T2322C
  • C2349T
  • C2355T
  • C2359T
  • A2368T
  • G2379A
  • A2386G
  • T2388C
  • C2395T
Deletions
N/A
Insertions
N/A

Amino acid substitutions

Substitutions called relative to the NC_001474.2 reference

Substitutions

E

  • E:I462V
  • E:T478S
  • E:I484V
Deletions
N/A
Insertions
N/A

Report an issue with this sequence or metadata

Create GitHub issue